Lista de software
Módulos disponibles
A continuación se comparte la lista de software disponible:
------------------------------------------------------------------------------------ /opt/ohpc/pub/moduledeps/gnu14-openmpi5 -------------------------------------------------------------------------------------
adios2/2.10.1 extrae/3.8.3 imb/2021.3 netcdf-cxx/4.3.1 (D) omb/7.5 petsc/3.18.1 ptscotch/7.0.7 scalapack/2.2.2 sionlib/1.7.7 tau/2.31.1
boost/1.88.0 fftw/3.3.10 mfem/4.4 netcdf-fortran/4.6.2 (D) opencoarrays/2.10.2 phdf5/1.14.6 py3-mpi4py/3.1.5 scalasca/2.6.2 slepc/3.18.0 trilinos/13.4.0
dimemas/5.4.2 hypre/2.33.0 mumps/5.2.1 netcdf/4.9.3 (D) otf2/3.1.1 pnetcdf/1.14.0 py3-scipy/1.5.4 scorep/9.0 superlu_dist/6.4.0
----------------------------------------------------------------------------------------- /opt/ohpc/pub/moduledeps/gnu14 -----------------------------------------------------------------------------------------
R/4.5.0 cubew/4.9 gsl/2.8 impi/2021.11 metis/5.1.0 mvapich2/2.3.7 netcdf-fortran/4.6.2 opari2/2.0.9 openmpi5/5.0.7 (L) plasma/24.8.7 scotch/7.0.7
cubelib/4.9 gotcha/1.0.8 hdf5/1.14.6 likwid/5.4.1 mpich/3.4.3-ofi netcdf-cxx/4.3.1 netcdf/4.9.3 openblas/0.3.29 pdtoolkit/3.25.1 py3-numpy/1.26.4 superlu/7.0.0
----------------------------------------------------------------------------------------- /opt/ohpc/pub/moduledeps/spack -----------------------------------------------------------------------------------------
apptainer/1.4.1-gcc-14.2.0-linux-rocky9-x86_64-7o5igee gmake/4.4.1-gcc-14.2.0-linux-rocky9-x86_64-ujhqwyf osu-micro-benchmarks/7.5-gcc-14.2.0-linux-rocky9-x86_64-mhe77eu
cmake/3.31.8-gcc-14.2.0-linux-rocky9-x86_64-5qiwkst hpl/2.3-gcc-14.2.0-linux-rocky9-x86_64-zdxj4xk stream/5.10-gcc-14.2.0-linux-rocky9-x86_64-fddryf3
cuda/12.9.0-none-none-linux-rocky9-x86_64-2tatrxa julia/1.11.5-gcc-14.2.0-linux-rocky9-x86_64-3mgvuan stress/1.0.4-gcc-14.2.0-linux-rocky9-sapphirerapids-e5xrmag
------------------------------------------------------------------------------------------- /opt/ohpc/pub/modulefiles --------------------------------------------------------------------------------------------
EasyBuild/5.1.2 bpp/4.7.0 cuda/25.1 (D) gatk/4.4.0.0 intel/2024.0.0.rpmnew minimap2/2.26 pmix/4.2.9 seqkit/2.10.0
augustus/3.5.0 bpp/4.8.4 (D) cutadapt/4.4 gnu12/12.2.0 intel/2024.0.0 (D) mrbayes/3.2.7 porechop/0.2.4 spack/1.0.2
autotools (L) bracken/2.8 diamond/2.1.11 gnu14/14.2.0 (L) intel/2025.0.4 muscle/5.3 prodigal/2.6.3 spades/4.2.0
bamtools/2.5.2 busco/5.4.7 dorado/0.9.6 gnu15/15.2.0 iqtree/2.2.2.6 nextflow/23.10.1 prokka/1.14.6 star/2.7.10b
bcftools/1.18 bwa/0.7.17 dorado/1.0.0 hisat2/2.2.1 kallisto/0.48.0 nvtop/3.2.0 (L) prun/2.2 (L) trimmomatic/0.39
beast2/2.7.5 cdhit/4.8.1 dorado/1.1.1 (D) hmmer/3.4 kraken2/2.1.3 ohpc (L) quast/5.2.0 ucx/1.18.0 (L)
bedtools/2.31.1 charliecloud/0.40 fastp/0.23.4 htslib/1.18 libfabric/1.18.0 (L) os raxml/8.2.12 valgrind/3.25.1
blast/2.14.1 chopper/0.10.0b fastqc/0.12.1 hwloc/2.12.0 (L) mafft/7.525 papi/6.0.0 rsem/1.3.3 vcftools/0.1.16
bowtie2/2.5.1 clustalo/1.2.4 featurecounts/2.0.3 intel/2023.2.1.rpmnew megahit/1.2.9 picard/3.0.0 salmon/0.9.1
bowtie2/2.5.4 (D) cmake/4.1.2 (D) flye/2.9.3 intel/2023.2.1 metaphlan/4.0.6 picard/3.4.0 (D) samtools/1.18
Where:
D: Default Module
L: Module is loaded